I imported an STL model with the control surfaces colored differently into Blender. I used boxes with displaced edges to match the elevon outlines and then intersected / subtracted, resulting in three STL files: the spaceplane body with the elevons removed, the right elevon and the left elevon.

Cutting elevons
Precise cutting of elevons in Blender

I then recombined the three STLs into Blender and generated four models:

Elevons at zero degrees, both elevons 15 deg up, then both down, then right up and left down. I exported them as STL files. These models will be analyzed by the CFD software to get roll and pitch stability derivatives.

STL model of elevon deflection
STL model with elevons opposite